Task Force VIII

From LipidomicsWiki

Contents 1 Deliverables M2 2 Deliverables M6 3 Deliverables M10 4 Deliverables M12 5 Available data 6 Synopsis list 7 Objectives 8 Members and Partners 9 Synopsis genes and Agilent probes without EnsEMBL ID 10 Lipid Species 11 Action Points 2010 12 Lipid species handling with ChEBI and LipidMaps

Deliverables M2

Creation of task forces for the various data types.

See Data type taskforces

Deliverables M6

Standard Processing Procedures

Deliverables M10

Implementation of Standard Processing Procedures

Deliverables M12

Processing Pipelines

Available data

A list of all available data with additional information can be found following page:

Available Data

Synopsis list

Handling Synopsis Lists

Objectives

• Define standard processing procedures (SPP´s)
• Make data publicly available via the internet (LipidomicNet)
• Enable knowledge exchange (wiki-concept; LipidomicNet)
• Integrate LipidomicNet with other (European) lipid databases and global ressources (e.g. KEGG, LIPID MAPS, ...)

Members and Partners

• P01: University Hospital Regensburg and Fraunhofer Project Groups
  • Prof. Gerd Schmitz (co-chair)
  • Stefan Lehneis
  • Markus Solleder
  • Josef Mages

• P07: University of Graz
  • Trajanoski

• P10: Max-Planck-Institute Dresden
  • Dr. Christoph Thiele
  • Fava
  • Massier
• P15: University of Bonn
  • Dr. Thomas Kolter
  • Farwanha

• P16: European Bioinformatics Institute
  • Dr. Juan Antonio Vizcaíno (chair)
  • Henning Hermjakob
  • Dr. Lennart Martens (former chair)

• P17:Universitätsmedizin Göttingen / Georg-August-Universität Göttingen
  • Dr. Anatolij Potapov
  • Jürgen Dönitz

• P18: BIOBASE Gmbh
  • Dr. Alexander Kel
  • Lewicki-Potapov

• INTEGROMICS SL
  • Prof. Jose Maria Carazo
  • Dr. Pedro Carmona
  • Tatiana Lloret

• Institute of Systems Biology Ltd.
  • Fedor Kolpakov
  • Tolstyh

Synopsis genes and Agilent probes without EnsEMBL ID

Download as xls

Lipid Species

Lipid Species List from 4 Feb 2010

Lipid Species List from 1 July 2011

Action Points 2010

TF8_ActionPoints2010

Lipid species handling with ChEBI and LipidMaps

InformationCHEBI_1.pdf‎

SupplemetaryTable1_1.pdf‎

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Task Force I
Task Force II
Task Force III
Task Force IV
Task Force V
Task Force VI
Task Force VII
Task Force IX